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MOTIVATION: Molecular biotechnology now makes it possible to build elaborate systems models, but the systems biology community needs information standards if models are to be shared, evaluated and developed cooperatively. RESULTS: We summarize the Systems Biology Markup Language (SBML) Level 1, a free, open, XML-based format for representing biochemical reaction networks. SBML is a software-independent language for describing models common to research in many areas of computational biology, including cell signaling pathways, metabolic pathways, gene regulation, and others. AVAILABILITY: The specification of SBML Level 1 is freely available from http://www.sbml.org/
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California Institute of Technology
2 shared publicationsCalifornia Institute of Technology
2 shared publicationsUniversity of Cambridge
2 shared publicationsCalifornia Institute of Technology
1 shared publicationCalifornia Institute of Technology
1 shared publicationCalifornia Institute of Technology
1 shared publicationCalifornia Institute of Technology
1 shared publicationUniversity of California, Berkeley
1 shared publicationUniversity of Cambridge
1 shared publicationOkinawa Institute of Science and Technology Graduate University
1 shared publicationUniversity of Auckland
1 shared publication